Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911561.1_cds_XP_016461554.1_54862
CDS Infomation

[gene=LOC107784875] [db_xref=GeneID:107784875] [protein=putative F-box/LRR-repeat protein At5g02930] [protein_id=XP_016461554.1] [location=complement(join(49567..49926,50345..50509,50889..52115))] [gbkey=CDS]
Sequence

ATGGCTTCTTCCGGCGATTGCAGCGAAGATGACGGCAGTATTTCTTACGGCGATTACAGC
GAAGAAGACGACTGTAGAAATAGTATTTCTTCCGGCGACTACAGCGAAGATGACGGCTTT
AGTGGTTGTATGTCTTGCGGCGACTACAGCGAAGAAGACGGCTTTAGTGGTAGTATTTCT
TCTGACGACTGCAGCGAAGATGACGGCAGTATTTCTTCCGGCGACTTCAGCGAAGATCCT
CCACCGTCGAAGAAACAGGAAGTGAGTGAAGTTGAAGGACCCCTAGACGACTATATCAGT
CAGTTGCCGGACGCACTCCTTGTTCAGATTCTCTCTCTTTTGCCTACGACAGAGGAGGCG
TACGCGACATGTGTTCTCTCAAAAGGGTGGCAGCATCTCTGGACTTCTGTTTACAACTTC
TATTTCAGTCATTTTCGCGGGAAATCAAAACGCTTCCTATCATTTGTGGACTATGTGTTA
GCTCATTCCGTTGCTTCCAAAATTAAAAAGTTTGAGATCCACTGTAGTCGCCTGTTTAAA
TACAAGTCCCAAATCGGTCGATGGCTTCGTTTTGCTGTTGACAAAAATGTGGAAGATGTT
ATAATCTATTCTGATCCTCACGTTTGCATATTGCCTGAATCTTTCTTCACCTGTTCGTCG
TTGATAACGTTACATCTTGTAGAGAGTTGCTTGGTTTCTGATATTGTCATAGCGTGGAAG
TCTCTAACGAGCATCAAGTTGGAGGATATGGTGGTAGTGGATGCCGAAATTATGAACATA
CTCTCAGGGTGTCCTTCACTGGAAACTATTGTATTTCATAAGGTTGGGGGCTTTCGTCGC
CTGGAAATTAAATCTTCAAAAGTAAAAAGCCTGGCATTGGAAGGTTATTGGCTAGATGAA
GGTTATTGGCCGGATGATGATGGAAGTGGAAGTAATCGTTCCTTCGAAATTTTTGCCCCG
TATCTTCAGCATTTGGAACTTTCACAAGATTTTTATGATTTCAGGTGTAGGCTTGTAGAT
GTATCCTCCTTGGTTGATGCTAAGATTACTTTCGACATTAAATGTTTCAAAGAATTTCAG
GATAATCCTGATCAAGATTCTGATGATGATGAGGAAGAGGATGACAGTTGTCGTGATTTT
CATCAAGGTTTTAAGACCCTCGTCCAAGATTATCTTCAAAAGCTGAGATGTGCAACCAAG
TTAACTATCGGAACTTGGTTCACTGAGGTCCTGTGCATATTGCAGTTTAAAGAGGTGCCA
ATTCCAGATTTGAAATGCAAATATCTAGAGCTAGAGTTGCACTTGGAAAAGTTTAATTTG
TATGGAGCAGCTGGGCTTTTGCGAGCCTCACCTCTTGTGGAGACAGTCATCATAGACGTC
GAAAATCAGCCTTTTAATGATTTCAGATGCCGCTTTGAGTTTGGATATTTGGAGAAAGGT
GATAACATTGATCTGCAGAGATATATTTCAAGCTTTGTCTTTCCCAACCTAAAGAAGGTT
AAGATTGTCATCTCCCCTGGGATGTGCTTGGAGGATCATCTCGAATGGGAATATATCAGG
AAGGTTTTCCAACTTTCAAAATTTCTGTTAAAGAATGCATTGGTTTTGGAGAAGTTTGTC
ATCGTATCAAGTAGACGAAGGTGTGAGATATGTTATACCAAATGTGTGTCCCGATATTTA
TCTCGATTGGCTAAGAAGCTGTTAAATTGCCCAAGATCCTCCGCCAATTCTGTGATTATC
TTCCAGGAGTGA

Peptide Sequence

PEP ID

XP_016461554.1
PEP Infomation

PREDICTED: putative F-box/LRR-repeat protein At5g02930 [Nicotiana tabacum]
Sequence

MASSGDCSEDDGSISYGDYSEEDDCRNSISSGDYSEDDGFSGCMSCGDYSEEDGFSGSIS
SDDCSEDDGSISSGDFSEDPPPSKKQEVSEVEGPLDDYISQLPDALLVQILSLLPTTEEA
YATCVLSKGWQHLWTSVYNFYFSHFRGKSKRFLSFVDYVLAHSVASKIKKFEIHCSRLFK
YKSQIGRWLRFAVDKNVEDVIIYSDPHVCILPESFFTCSSLITLHLVESCLVSDIVIAWK
SLTSIKLEDMVVVDAEIMNILSGCPSLETIVFHKVGGFRRLEIKSSKVKSLALEGYWLDE
GYWPDDDGSGSNRSFEIFAPYLQHLELSQDFYDFRCRLVDVSSLVDAKITFDIKCFKEFQ
DNPDQDSDDDEEEDDSCRDFHQGFKTLVQDYLQKLRCATKLTIGTWFTEVLCILQFKEVP
IPDLKCKYLELELHLEKFNLYGAAGLLRASPLVETVIIDVENQPFNDFRCRFEFGYLEKG
DNIDLQRYISSFVFPNLKKVKIVISPGMCLEDHLEWEYIRKVFQLSKFLLKNALVLEKFV
IVSSRRRCEICYTKCVSRYLSRLAKKLLNCPRSSANSVIIFQE

Transcript Sequence

Gene sequence data has not been registered.